;;; ob-fortran.el --- org-babel functions for fortran
-;; Copyright (C) 2011-2012 Free Software Foundation, Inc.
+;; Copyright (C) 2011-2016 Free Software Foundation, Inc.
;; Authors: Sergey Litvinov
;; Eric Schulte
;; Keywords: literate programming, reproducible research, fortran
;; Homepage: http://orgmode.org
-;; This program is free software; you can redistribute it and/or modify
-;; it under the terms of the GNU General Public License as published by
-;; the Free Software Foundation; either version 3, or (at your option)
-;; any later version.
+;; This file is part of GNU Emacs.
;;
-;; This program is distributed in the hope that it will be useful,
+;; GNU Emacs is free software: you can redistribute it and/or modify
+;; it under the terms of the GNU General Public License as published by
+;; the Free Software Foundation, either version 3 of the License, or
+;; (at your option) any later version.
+
+;; GNU Emacs is distributed in the hope that it will be useful,
;; but WITHOUT ANY WARRANTY; without even the implied warranty of
;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;; GNU General Public License for more details.
-;;
+
;; You should have received a copy of the GNU General Public License
-;; along with GNU Emacs; see the file COPYING. If not, write to the
-;; Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor,
-;; Boston, MA 02110-1301, USA.
+;; along with GNU Emacs. If not, see <http://www.gnu.org/licenses/>.
;;; Commentary:
;;; Code:
(require 'ob)
-(require 'ob-eval)
(require 'cc-mode)
(declare-function org-entry-get "org"
(pom property &optional inherit literal-nil))
+(declare-function org-every "org" (pred seq))
(defvar org-babel-tangle-lang-exts)
(add-to-list 'org-babel-tangle-lang-exts '("fortran" . "F90"))
(defun org-babel-execute:fortran (body params)
"This function should only be called by `org-babel-execute:fortran'"
(let* ((tmp-src-file (org-babel-temp-file "fortran-src-" ".F90"))
- (tmp-bin-file (org-babel-temp-file "fortran-bin-"))
+ (tmp-bin-file (org-babel-temp-file "fortran-bin-" org-babel-exeext))
(cmdline (cdr (assoc :cmdline params)))
(flags (cdr (assoc :flags params)))
(full-body (org-babel-expand-body:fortran body params))
(mapconcat 'identity
(if (listp flags) flags (list flags)) " ")
(org-babel-process-file-name tmp-src-file)) ""))))
- ((lambda (results)
- (org-babel-reassemble-table
- (if (member "vector" (cdr (assoc :result-params params)))
- (let ((tmp-file (org-babel-temp-file "f-")))
- (with-temp-file tmp-file (insert results))
- (org-babel-import-elisp-from-file tmp-file))
- (org-babel-read results))
- (org-babel-pick-name
- (cdr (assoc :colname-names params)) (cdr (assoc :colnames params)))
- (org-babel-pick-name
- (cdr (assoc :rowname-names params)) (cdr (assoc :rownames params)))))
- (org-babel-trim
- (org-babel-eval
- (concat tmp-bin-file (if cmdline (concat " " cmdline) "")) "")))))
+ (let ((results
+ (org-babel-trim
+ (org-babel-eval
+ (concat tmp-bin-file (if cmdline (concat " " cmdline) "")) ""))))
+ (org-babel-reassemble-table
+ (org-babel-result-cond (cdr (assoc :result-params params))
+ (org-babel-read results)
+ (let ((tmp-file (org-babel-temp-file "f-")))
+ (with-temp-file tmp-file (insert results))
+ (org-babel-import-elisp-from-file tmp-file)))
+ (org-babel-pick-name
+ (cdr (assoc :colname-names params)) (cdr (assoc :colnames params)))
+ (org-babel-pick-name
+ (cdr (assoc :rowname-names params)) (cdr (assoc :rownames params)))))))
(defun org-babel-expand-body:fortran (body params)
"Expand a block of fortran or fortran code with org-babel according to
(defines (org-babel-read
(or (cdr (assoc :defines params))
(org-babel-read (org-entry-get nil "defines" t))))))
- (mapconcat 'identity
- (list
- ;; includes
- (mapconcat
- (lambda (inc) (format "#include %s" inc))
- (if (listp includes) includes (list includes)) "\n")
- ;; defines
- (mapconcat
- (lambda (inc) (format "#define %s" inc))
- (if (listp defines) defines (list defines)) "\n")
- ;; body
- (if main-p
- (org-babel-fortran-ensure-main-wrap
- (concat
- ;; variables
- (mapconcat 'org-babel-fortran-var-to-fortran vars "\n")
- body) params)
- body) "\n") "\n")))
+ (mapconcat 'identity
+ (list
+ ;; includes
+ (mapconcat
+ (lambda (inc) (format "#include %s" inc))
+ (if (listp includes) includes (list includes)) "\n")
+ ;; defines
+ (mapconcat
+ (lambda (inc) (format "#define %s" inc))
+ (if (listp defines) defines (list defines)) "\n")
+ ;; body
+ (if main-p
+ (org-babel-fortran-ensure-main-wrap
+ (concat
+ ;; variables
+ (mapconcat 'org-babel-fortran-var-to-fortran vars "\n")
+ body) params)
+ body) "\n") "\n")))
(defun org-babel-fortran-ensure-main-wrap (body params)
"Wrap body in a \"program ... end program\" block if none exists."
(if (string-match "^[ \t]*program[ \t]*.*" (capitalize body))
- (let ((vars (mapcar #'cdr (org-babel-get-header params :var))))
- (if vars (error "cannot use :vars if 'program' statement is present"))
- body)
+ (let ((vars (mapcar #'cdr (org-babel-get-header params :var))))
+ (if vars (error "Cannot use :vars if `program' statement is present"))
+ body)
(format "program main\n%s\nend program main\n" body)))
(defun org-babel-prep-session:fortran (session params)
"This function does nothing as fortran is a compiled language with no
support for sessions"
- (error "fortran is a compiled languages -- no support for sessions"))
+ (error "Fortran is a compiled languages -- no support for sessions"))
(defun org-babel-load-session:fortran (session body params)
"This function does nothing as fortran is a compiled language with no
support for sessions"
- (error "fortran is a compiled languages -- no support for sessions"))
+ (error "Fortran is a compiled languages -- no support for sessions"))
;; helper functions
((stringp val)
(format "character(len=%d), parameter :: %S = '%s'\n"
(length val) var val))
+ ;; val is a matrix
+ ((and (listp val) (org-every #'listp val))
+ (format "real, parameter :: %S(%d,%d) = transpose( reshape( %s , (/ %d, %d /) ) )\n"
+ var (length val) (length (car val))
+ (org-babel-fortran-transform-list val)
+ (length (car val)) (length val)))
((listp val)
(format "real, parameter :: %S(%d) = %s\n"
- var (length val) (ob-fortran-transform-list val)))
+ var (length val) (org-babel-fortran-transform-list val)))
(t
- (error (format "the type of parameter %s is not supported by ob-fortran"
- var))))))
+ (error "the type of parameter %s is not supported by ob-fortran" var)))))
-(defun ob-fortran-transform-list (val)
+(defun org-babel-fortran-transform-list (val)
"Return a fortran representation of enclose syntactic lists."
(if (listp val)
- (concat "(/" (mapconcat #'ob-fortran-transform-list val ", ") "/)")
+ (concat "(/" (mapconcat #'org-babel-fortran-transform-list val ", ") "/)")
(format "%S" val)))
(provide 'ob-fortran)